Publications

List of Published Articles

Ordered by Recency

  1. Lu G, Sun H, She P, Youn J-Y, Warburton S, Ping P, Vondriska TM , Cai H, Lynch CJ, Wang Y. Protein phosphatase 2Cm regulates branched chain amino acid catabolism through dephosphorylation of the branched chain a-ketoacid-dehydrogenase complex in mice and cultured cells. 2009; 119:1678–1687.
  2. Singh H, Warburton S, Vondriska TM , Khakh BS. Proteomics to identify proteins interacting with P2X2 ligand-gated cation channels. 2009; 27: pii 1178.
  3. Mitchell-Jordan S, Herzog T, Ren S, Warburton S, Zhang M, Wang S, Alitalo K, Wang Y, Vondriska TM . Loss of Bmx non-receptor tyrosine kinase prevents pressure overload-induced cardiac hypertrophy. 2008; In press.
  4. Qu Z, Vondriska TM . Effects of cascade length, kinetics and feedback on signal transduction dynamics in a simplified cascade model. 2009; 6:16007.
  5. MacLellan WR, Wang Y, Vondriska TM , Weiss JN, Ping P. Proteomic insights into cardiac cell death and survival. 2008; 2:837–844.
  6. Mayr M, Liem DA, Zhang J, Li X, Avliyakulov NK, Yang JI, Young G, Vondriska TM , Ladroue C, Madhu B, Griffiths JR, Gomes A, Xu Q, Ping P. Proteomic and metabolomic analysis of cardioprotection. 2008; 46:268–277.
  7. Vondriska TM , Wang Y. A new (heat) shocking player in cardiac hypertrophy. 2008; In press.
  8. Yang L, Vondriska TM , Han Z, MacLellan WR, Weiss JN, Qu Z. Deducing topology of protein-protein interaction networks from experimentally measured subnetworks. 2008; 9:301.
  9. Zhang J, Li X, Mueller M, Wang Y, Zong C, Deng N, Vondriska TM , Liem DA, Yang JI, Korge P, Honda HM, Weiss JN, Apweiler R, Ping P. Systematic characterization of the murine mitochondrial proteome using functionally validated cardiac mitochondria. 2008; 8:1564–1575.
  10. Wang GW, Guo Y, Vondriska TM , Zhang J, Zhang S, Tsai LL, Zong C, Bolli R, Bhatnagar A, Prabhu SD. Acrolein consumption exacerbates myocardial ischemic injury an blocks nitric oxide induced PKC signaling and cardioprotection. 2008; 44:1016–1022.
  11. Warburton S, White MY, Van Eyk JE, Cotter RJ, Ping P, Dunn MJ, Vondriska TM . Cardiovascular Initiative of the Human Proteome Organisation, 5th Workshop October 2007, Seoul, Korea. 2008; 8:924–926.
  12. Gugiu BG, Mouillesseaux K, Duong V, Herzog T, Hekimian A, Koroniak L, Vondriska TM , Watson AD. Protein targets of oxidized phospholipids in endothelial cells. 2008; 49:510–520.
  13. Han Z, Vondriska TM , Yang L, MacLellan WR, Weiss JN, Qu Z. Signal transduction network motifs and biological memory. 2007; 246:755–761.
  14. Taylor CF, Paton NW, Lilley KS, Binz PA, Julian RK, Jones AR, Zhu W, Apweiler R, Aebersold R, Deutsch EW, Dunn MJ, Heck AJR, Leitner A, Macht M, Mann M, Martens L, Neubert TA, Patterson SD, Ping P, Seymour SL, Souda P, Tsugita A, Vandekerckhove J, Vondriska TM , Whitelegge JP, Wilkins MR, Xenarios I, Yates JR, Hermjakob H. The minimum information about a proteomics experiment (MIAPE). 2007; 25:887–893.
  15. Berhane BT, Zong C, Liem DA, Huang A, Le S, Edmondson RD, Jones RC, Qiao X, Whitelegge JP, Ping P, Vondriska TM . Cardiovascular-related proteins identified in the HUPO plasma proteome project pilot phase. 2005; 3520–3530.
  16. Wang GW, Liem DA, Vondriska TM , Honda HM, Korge P, Pantaleon DM, Qiao X, Wang Y, Weiss JN, Ping P. Nitric oxide donors protect the murine myocardium against infarction via modulation of mitochondrial permeability transition. 2005; 288:H1290–1295.
  17. Ping P, Vondriska TM , Creighton C, Gandhi TKB, Yang Z, Menon R, Drwal G, Kellman M, Peri S, Suresh S, Gronborg M, Molina H, Chaerkady R, Rashmi CB, Muthusamy B, Shet A, Gerszten R, Wu H, Raftery M, Wasinger V, Schulze-Knappe P, Hanash S, Paik YK, Hancock W, Omenn G, States D, Pandey A. A functional annotation of subproteomes in human plasma. 2005; 3506–3519.
  18. Zhang J, Baines CP, Zong C, Cardwell EM, Wang GW, Vondriska TM , Ping P. Characterization of myocardial PKC e-Akt-eNOS signaling modules by functional proteomics. 2004; 288:H954–961.
  19. * Vondriska TM , Pass JM, Ping P. Scaffold proteins and assembly of multiprotein signaling complexes. 2004; 37:391–397.
  20. Zhang J, Ping P, Wang GW, Lu M, Pantaleon DM, Tang XL, Bolli R, Vondriska TM . Bmx, a member of the Tec family of non-receptor tyrosine kinases, is a novel participant in pharmacological cardio-protection. 2004; 287:H2364–2366.
  21. MacLellan WR, Ping P, Vondriska TM . Heart disease leaves its mark: Proteomics-based biosignatures in acute coronary syndrome. 2004; 44:1584–1586.
  22. Tang XL, Kodani E, Takano H, Hill M, Shinmura K, Vondriska TM , Ping P, Bolli R. Protein tyrosine kinase signaling is necessary for nitric oxide donor-induced late preconditioning against myocardial stunning in conscious rabbits. 2003; 284:H1441–1448.
  23. Zhang J, Ping P, Vondriska TM , Tang XL, Wang GW, Cardwell EM, Bolli R. Cardioprotection involves activation of NF-kB via PKC-dependent tyrosine and serine phosphorylation of I kB-a. 2003; 285:H1753–1758.
  24. Vondriska TM , Ping P. Multiprotein signaling complexes and regulation of cardiac phenotype. 2003; 35:1027–1033.
  25. Pass JM, Zhang J, Vondriska TM , Ping P, (Newton AC, ed.). Functional proteomic analysis of PKC signaling complexes. Methods in Molecular Biology: Protein Kinase C Protocols. Humana Press; New Jersey, USA, 2002; 233:369–385.
  26. Ping P, Song C, Zhang J, Guo Y, Cao X, Li RC, Wu W, Vondriska TM , Pass JM, Tang XL, Pierce WM Jr, Bolli R. Formation of PKC e-Lck modules confers cardioprotection. 2002; 109:499–507.
  27. Vondriska TM , Zhang J, Ping P, (Van Eyk JE and Dunn MJ, ed.). Proteomic characterization of protein kinase C signaling tasks in the heart. Proteomic and Genomic Analysis of Cardiovascular Disease. Wiley-VCH, 2002; 315–324.
  28. Edmondson RD, Vondriska TM , Biederman KJ, Zhang J, Allen DL, Zheng YT, Jones RC, Xiu JX, Cardwell EM, Pisano MR. Protein kinase C e complexes contain metabolism and transcription / translation-related proteins: complementary electrophoretic separation techniques and LC/MS/MS. 2002; 1:421–433.
  29. Vondriska TM , Ping P. Functional proteomics to study protection of the ischemic myocardium. 2002; 6:563–570.
  30. Vondriska TM , Zhang J, Song C, Tang XL, Cao X, Baines CP, Pass JM, Bolli R, Ping P. PKC e-Src modules direct signal transduction in nitric oxide-induced cardioprotection: complex formation as a means for cardioprotective signaling. 2001; 88:1306–1313.
  31. Vondriska TM , Klein JB, Ping P. Use of functional proteomics to investigate PKC e-mediated cardioprotection: the signaling module hypothesis. 2001; 280:H1434–1441.
  32. * Song C, Vondriska TM , Wang GW, Klein JB, Cao X, Zhang J, Kang YJ, D’Souza S, Ping P. Molecular conformation is a major determinant of module formation: Example of PKC e and Src tyrosine kinase. 2001; 282:H1166–1171.
  1. Shared first authorship